Reads and processes an Axiom GT report file, extracting date information
and sample call rate data with quality comments.
Usage
create_com_file(file_path, call_rate_threshold = 0.95)
Arguments
- file_path
Character string. Path to the AxiomGT report file (.txt)
- call_rate_threshold
Numeric. Threshold for call rate quality (default: 0.95)
Value
A list containing:
- formatted_date
Character string in DDMMYY format
- data
Tibble with Sample ID, Call Rate, and Comment columns
Examples
if (FALSE) { # \dontrun{
result <- create_com_file("path/to/AxiomGT1.report.txt")
date <- result$formatted_date
data <- result$data
} # }